ENSDARG00000090418


Danio rerio

Features
Gene ID: ENSDARG00000090418
  
Biological name :wdsub1
  
Synonyms : A0AUS0 / WD repeat, sterile alpha motif and U-box domain containing 1 / wdsub1
  
Possible biological names infered from orthology : Q8N9V3 / Q9D0I6 / WD repeat, SAM and U-box domain containing 1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 12006557
Gene end: 12032704
  
Corresponding Affymetrix probe sets: Dr.12072.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000106094
NCBI entrez gene - 777721     See in Manteia.
swissprot - A0AUS0
swissprot - E7F9P4
ZFIN ID - ZDB-GENE-061110-97
Ensembl - ENSDARG00000090418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDSUB1ENSGALG00000012574Gallus gallus
 Q8N9V3ENSG00000196151Homo sapiens
 Q9D0I6ENSMUSG00000026988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
apaf1 / apoptotic peptidase activating factor 1 / O14727* / O88879* / Apoptotic protease-activating factor 1 *ENSDARG0000002123914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR001680  WD40 repeat
 IPR003613  U box domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr