ENSDARG00000091006


Danio rerio

Features
Gene ID: ENSDARG00000091006
  
Biological name :cobl
  
Synonyms : cobl / cordon-bleu WH2 repeat protein
  
Possible biological names infered from orthology : O75128 / Protein cordon-bleu / Q5NBX1
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 8529772
Gene end: 8663552
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156867
Ensembl peptide - ENSDARP00000157032
Ensembl peptide - ENSDARP00000018030
Ensembl peptide - ENSDARP00000141202
Ensembl peptide - ENSDARP00000149013
NCBI entrez gene - 497312     See in Manteia.
swissprot - A0A0R4IXG5
swissprot - T1ECS5
ZFIN ID - ZDB-GENE-091020-11
Ensembl - ENSDARG00000091006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COBLENSGALG00000013102Gallus gallus
 COBLENSG00000106078Homo sapiens
 CoblENSMUSG00000020173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cobll1a / cordon-bleu WH2 repeat protein-like 1a / Q53SF7* / Q3UMF0* / COBLL1* / Cordon-bleu protein-like 1 * / cordon-bleu WH2 repeat protein like 1*ENSDARG000000898589


Protein motifs (from Interpro)
Interpro ID Name
 IPR003124  WH2 domain
 IPR019025  Cordon-bleu, ubiquitin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle motile cilium decreased length , abnormal
Kupffers vesicle ciliated epithelial cell physical object quality , abnormal
Show

 ZFA:0000008 brain brain necrotic , abnormal
brain unstructured , abnormal
brain edematous , abnormal
Show

 ZFA:0000092 axis axis decreased length , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct motile cilium decreased length , abnormal
pronephric duct motile cilium direction , abnormal
Show

 ZFA:0000360 heart tube heart tube bilateral symmetry , abnormal
Show

 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast has fewer parts of type neuromast kinocilium, abnormal
posterior lateral line neuromast stereocilium decreased length , abnormal
posterior lateral line neuromast kinocilium decreased length , abnormal
posterior lateral line neuromast decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism increased curvature , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk curved ventral , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curled , abnormal
Show

 ZFA:0001557 pronephric glomerulus pronephric glomerulus cystic , abnormal
Show

 ZFA:0001558 pronephric tubule pronephric tubule increased diameter , abnormal
Show

 ZFA:0001620 pronephric proximal convoluted tubule pronephric proximal convoluted tubule increased diameter , abnormal
Show

 ZFA:0009035 ciliated epithelial cell ciliated epithelial cell filamentous actin decreased mass , abnormal
ciliated epithelial cell apical cortex composition , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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