ENSDARG00000091320


Danio rerio

Features
Gene ID: ENSDARG00000091320
  
Biological name :nlrc6
  
Synonyms : nlrc6 / NLR family CARD domain containing 6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 54766943
Gene end: 54785183
  
Corresponding Affymetrix probe sets: Dr.25947.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122806
Ensembl peptide - ENSDARP00000104685
NCBI entrez gene - 678565     See in Manteia.
RefSeq - XM_005160181
swissprot - Q1RLV6
swissprot - A5PF24
ZFIN ID - ZDB-GENE-060421-8264
Ensembl - ENSDARG00000091320
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-196h16.4ENSDARG0000009478286
si:ch211-196h16.5ENSDARG0000006926482
si:ch211-233m11.1ENSDARG0000007465371
si:ch211-149a19.3ENSDARG0000007945668
nlrc8 / NLR family CARD domain containing 8ENSDARG0000007681966
si:dkey-121n8.7ENSDARG0000009406765
CABZ01054391.1ENSDARG0000010395265
si:dkey-230i18.2ENSDARG0000009353263
si:ch73-24k9.2ENSDARG0000007891262
nlrc9 / NLR family CARD domain containing 9ENSDARG0000007810160
nlrc8 / si:dkey-121n8.7 / si:dkey-121n8.8ENSDARG0000009202559
si:ch211-181d7.1ENSDARG0000009184757
si:ch211-181d7.3ENSDARG0000006862155
si:dkey-23k10.2ENSDARG0000009770055
si:ch73-168d20.1ENSDARG0000003990054
si:ch211-181d7.1ENSDARG0000008827453
nlrp16 / NACHT, LRR and PYD domains-containing protein 16ENSDARG0000007767352
si:ch211-250k18.7ENSDARG0000009376151
si:ch211-156p11.1ENSDARG0000007160450
si:ch211-250k18.5ENSDARG0000006874949


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR006553  Leucine-rich repeat, cysteine-containing subtype
 IPR007111  NACHT nucleoside triphosphatase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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