ENSDARG00000039900


Danio rerio

Features
Gene ID: ENSDARG00000039900
  
Biological name :si:ch73-168d20.1
  
Synonyms : si:ch73-168d20.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 45077358
Gene end: 45119805
  
Corresponding Affymetrix probe sets: Dr.17012.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126848
Ensembl peptide - ENSDARP00000145114
NCBI entrez gene - 795914     See in Manteia.
RefSeq - XM_009297169
swissprot - R4GED5
ZFIN ID - ZDB-GENE-121214-44
Ensembl - ENSDARG00000039900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-23k10.2ENSDARG0000009770040
si:ch211-149a19.3ENSDARG0000007945640
nlrc8 / NLR family CARD domain containing 8ENSDARG0000007681940
si:dkey-230i18.2ENSDARG0000009353239
si:ch211-250k18.7ENSDARG0000009376138
si:ch211-196h16.4ENSDARG0000009478238
si:dkey-121n8.7ENSDARG0000009406738
si:ch211-213a13.2ENSDARG0000009302438
si:ch211-233m11.1ENSDARG0000007465338
nlrc6 / NLR family CARD domain containing 6ENSDARG0000009132038
si:ch211-250k18.5ENSDARG0000006874937
si:ch73-286h23.4ENSDARG0000009019337
si:ch211-196h16.5ENSDARG0000006926437
nlrc9 / NLR family CARD domain containing 9ENSDARG0000007810137
si:ch211-156p11.1ENSDARG0000007160437
si:dkey-126g1.7ENSDARG0000008670336
si:ch211-213a13.5ENSDARG0000007161836
si:ch211-181d7.1ENSDARG0000009184736
si:dkey-14o6.1ENSDARG0000009838335
nlrc8 / si:dkey-121n8.7 / si:dkey-121n8.8ENSDARG0000009202535


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR007111  NACHT nucleoside triphosphatase
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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