ENSDARG00000088870


Danio rerio

Features
Gene ID: ENSDARG00000088870
  
Biological name :si:dkey-265e15.5
  
Synonyms : si:ch211-22k7.9 / si:dkey-265e15.5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 30145984
Gene end: 30174588
  
Corresponding Affymetrix probe sets: Dr.2365.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114081
Ensembl peptide - ENSDARP00000143030
Ensembl peptide - ENSDARP00000129993
Ensembl peptide - ENSDARP00000003033
NCBI entrez gene - 560232     See in Manteia.
RefSeq - NM_001123254
RefSeq Peptide - NP_001116726
swissprot - F1QDL3
swissprot - F6NYW2
swissprot - A0A1L1QZA9
swissprot - A0A0R4IA49
ZFIN ID - ZDB-GENE-070424-160
ZFIN ID - ZDB-GENE-081104-6
Ensembl - ENSDARG00000088870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-279j5.1ENSDARG0000010145990
si:dkey-16p6.1 / si:dkey-237g15.2ENSDARG0000010030290
si:dkey-16p6.1ENSDARG0000010168989
si:dkey-16p6.1ENSDARG0000008824589
si:ch211-127b6.2 / si:dkey-196n19.2ENSDARG0000010332489
si:dkeyp-86c4.1 / si:dkey-193i10.4ENSDARG0000011608689
si:dkey-261j11.2ENSDARG0000010155188
si:dkey-14o6.1ENSDARG0000009838388
si:ch211-22k7.9ENSDARG0000008778886
si:dkey-26m3.3ENSDARG0000010169585
si:dkey-16p6.1ENSDARG0000010182885
si:dkey-16p6.1 / si:ch211-76m11.5 / si:dkey-159n16.2ENSDARG0000008883685
zgc:174944 / si:dkey-16p6.1ENSDARG0000009982584
si:dkey-72l17.5ENSDARG0000010441283
si:dkey-156c23.1 / si:ch211-226o13.1ENSDARG0000008771482
si:ch211-268b14.2ENSDARG0000010254282
zgc:174944 / si:ch211-171l17.14ENSDARG0000010138881
si:dkey-31n13.4 / si:dkey-156c23.1ENSDARG0000010131281
si:dkeyp-80d11.12ENSDARG0000010172879
si:dkey-238k10.3 / si:ch211-106j21.5ENSDARG0000010496679


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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