ENSDARG00000088836


Danio rerio

Features
Gene ID: ENSDARG00000088836
  
Biological name :si:ch211-76m11.5
  
Synonyms : si:ch211-76m11.5 / si:dkey-159n16.2 / si:dkey-16p6.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 43225728
Gene end: 43260960
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121680
Ensembl peptide - ENSDARP00000133441
Ensembl peptide - ENSDARP00000135897
Ensembl peptide - ENSDARP00000121149
swissprot - A0A0R4IE81
swissprot - A0A0R4IKX2
swissprot - E9QF46
swissprot - F1R5D8
ZFIN ID - ZDB-GENE-041210-278
ZFIN ID - ZDB-GENE-081103-43
ZFIN ID - ZDB-GENE-131121-650
Ensembl - ENSDARG00000088836
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-16p6.1ENSDARG0000008824595
si:dkey-26m3.3ENSDARG0000010169595
si:dkey-16p6.1ENSDARG0000010168994
si:ch211-22k7.9ENSDARG0000008778892
si:dkey-16p6.1ENSDARG0000010182891
si:dkeyp-86c4.1 / si:dkey-193i10.4ENSDARG0000011608690
si:ch211-127b6.2 / si:dkey-196n19.2ENSDARG0000010332490
si:dkey-261j11.2ENSDARG0000010155190
si:dkey-279j5.1ENSDARG0000010145990
si:dkey-16p6.1 / si:dkey-237g15.2ENSDARG0000010030289
si:dkey-14o6.1ENSDARG0000009838388
si:ch211-22k7.9 / si:dkey-265e15.5ENSDARG0000008887088
zgc:174944 / si:dkey-16p6.1ENSDARG0000009982588
si:ch211-268b14.2ENSDARG0000010254285
si:dkey-31n13.4 / si:dkey-156c23.1ENSDARG0000010131285
si:dkey-72l17.5ENSDARG0000010441285
si:dkey-156c23.1 / si:ch211-226o13.1ENSDARG0000008771485
si:dkeyp-5g9.1ENSDARG0000010055685
si:dkeyp-80d11.12ENSDARG0000010172881
zgc:174944 / si:ch211-171l17.14ENSDARG0000010138881


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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