ENSDARG00000087788


Danio rerio

Features
Gene ID: ENSDARG00000087788
  
Biological name :si:ch211-22k7.9
  
Synonyms : si:ch211-22k7.9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 39158005
Gene end: 39186901
  
Corresponding Affymetrix probe sets: Dr.16197.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125274
Ensembl peptide - ENSDARP00000148192
Ensembl peptide - ENSDARP00000106041
Ensembl peptide - ENSDARP00000115194
NCBI entrez gene - 100006564     See in Manteia.
RefSeq - NM_001126485
RefSeq Peptide - NP_001119957
swissprot - A0A0A0MPR3
swissprot - F1QC83
swissprot - H0WEJ6
ZFIN ID - ZDB-GENE-070424-160
Ensembl - ENSDARG00000087788
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-127b6.2 / si:dkey-196n19.2ENSDARG0000010332490
si:dkey-16p6.1ENSDARG0000010182887
si:dkey-16p6.1 / si:ch211-76m11.5 / si:dkey-159n16.2ENSDARG0000008883687
si:dkeyp-86c4.1 / si:dkey-193i10.4ENSDARG0000011608686
si:dkey-16p6.1 / si:dkey-237g15.2ENSDARG0000010030286
si:dkey-26m3.3ENSDARG0000010169586
si:dkey-261j11.2ENSDARG0000010155185
si:dkey-16p6.1ENSDARG0000008824585
si:dkey-279j5.1ENSDARG0000010145985
si:dkey-16p6.1ENSDARG0000010168985
zgc:174944 / si:dkey-16p6.1ENSDARG0000009982584
si:ch211-22k7.9 / si:dkey-265e15.5ENSDARG0000008887084
si:dkey-14o6.1ENSDARG0000009838384
si:dkey-72l17.5ENSDARG0000010441281
si:ch211-268b14.2ENSDARG0000010254280
si:dkey-31n13.4 / si:dkey-156c23.1ENSDARG0000010131280
si:dkey-156c23.1 / si:ch211-226o13.1ENSDARG0000008771480
si:dkeyp-5g9.1ENSDARG0000010055679
si:dkey-238k10.3 / si:ch211-106j21.5ENSDARG0000010496677
zgc:174944 / si:ch211-171l17.14ENSDARG0000010138877


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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