ENSDARG00000091538


Danio rerio

Features
Gene ID: ENSDARG00000091538
  
Biological name :zranb3
  
Synonyms : zinc finger, RAN-binding domain containing 3 / zranb3
  
Possible biological names infered from orthology : Q5FWF4 / Q6NZP1 / zinc finger RANBP2-type containing 3
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 12217920
Gene end: 12337781
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120083
Ensembl peptide - ENSDARP00000109706
Ensembl peptide - ENSDARP00000155255
NCBI entrez gene - 553237     See in Manteia.
swissprot - E7EXE0
swissprot - F1QDM4
ZFIN ID - ZDB-GENE-060712-1
Ensembl - ENSDARG00000091538
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZRANB3ENSGALG00000012223Gallus gallus
 Q5FWF4ENSG00000121988Homo sapiens
 Q6NZP1ENSMUSG00000036086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
btaf1 / BTAF1 RNA polymerase II, B-TFIID transcription factor-associated / O14981* / B-TFIID TATA-box binding protein associated factor 1*ENSDARG0000006008913
smarcal1 / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 / Q9NZC9*ENSDARG000001022654


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR001876  Zinc finger, RanBP2-type
 IPR002711  HNH endonuclease
 IPR003615  HNH nuclease
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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