ENSG00000121988


Homo sapiens

Features
Gene ID: ENSG00000121988
  
Biological name :ZRANB3
  
Synonyms : Q5FWF4 / zinc finger RANBP2-type containing 3 / ZRANB3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q21.3
Gene start: 135136916
Gene end: 135531236
  
Corresponding Affymetrix probe sets: 224124_at (Human Genome U133 Plus 2.0 Array)   239538_at (Human Genome U133 Plus 2.0 Array)   244092_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000383979
Ensembl peptide - ENSP00000441320
Ensembl peptide - ENSP00000480120
Ensembl peptide - ENSP00000264159
Ensembl peptide - ENSP00000384245
NCBI entrez gene - 84083     See in Manteia.
OMIM - 615655
RefSeq - XM_017005071
RefSeq - XM_017005065
RefSeq - XM_017005066
RefSeq - XM_017005067
RefSeq - XM_017005068
RefSeq - XM_017005069
RefSeq - XM_017005070
RefSeq - NM_001286568
RefSeq - NM_001286569
RefSeq - NM_032143
RefSeq - XM_005263809
RefSeq - XM_006712788
RefSeq - XM_011511958
RefSeq - XM_011511959
RefSeq - XM_011511960
RefSeq - XM_011511961
RefSeq - XM_011511963
RefSeq - XM_011511966
RefSeq Peptide - NP_115519
RefSeq Peptide - NP_001273497
RefSeq Peptide - NP_001273498
swissprot - F8WCT9
swissprot - Q5FWF4
swissprot - F5GYN7
Ensembl - ENSG00000121988
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zranb3ENSDARG00000091538Danio rerio
 ZRANB3ENSGALG00000012223Gallus gallus
 Q6NZP1ENSMUSG00000036086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NZC9 / SMARCAL1 / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1ENSG0000013837520
BTAF1 / O14981 / B-TFIID TATA-box binding protein associated factor 1ENSG0000009556413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR001876  Zinc finger, RanBP2-type
 IPR002711  HNH endonuclease
 IPR003615  HNH nuclease
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036443  Zinc finger, RanBP2-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000733 DNA strand renaturation IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009411 response to UV IDA
 biological_processGO:0031297 replication fork processing IDA
 biological_processGO:0036292 DNA rewinding IDA
 biological_processGO:0045910 negative regulation of DNA recombination IDA
 biological_processGO:0048478 replication fork protection IDA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0043596 nuclear replication fork IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004520 endodeoxyribonuclease activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036310 annealing helicase activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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