ENSDARG00000093313


Danio rerio

Features
Gene ID: ENSDARG00000093313
  
Biological name :ubb
  
Synonyms : ubb / ubiquitin B
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 42092227
Gene end: 42096331
  
Corresponding Affymetrix probe sets: Dr.25166.1.S1_at (Zebrafish Array)   Dr.25166.3.S1_a_at (Zebrafish Array)   NM_001013272_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000088354
Ensembl peptide - ENSDARP00000140603
NCBI entrez gene - 550134     See in Manteia.
RefSeq - NM_001013272
RefSeq Peptide - NP_001013290
swissprot - B0R193
swissprot - A0A0N4SUD2
ZFIN ID - ZDB-GENE-050411-10
Ensembl - ENSDARG00000093313
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubc / ubiquitin C / P0CG48* / P0CG50*ENSDARG0000010263286
si:ch211-202a12.4 / UBC* / P0CG48* / P0CG50* / ubiquitin C*ENSDARG0000000236973
isg15 / ISG15 ubiquitin-like modifier / P05161* / Q64339* / Ubiquitin-like protein ISG15 *ENSDARG000000863746


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR019954  Ubiquitin conserved site
 IPR019956  Ubiquitin
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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