ENSDARG00000094511


Danio rerio

Features
Gene ID: ENSDARG00000094511
  
Biological name :ccl20b
  
Synonyms : ccl20b / chemokine (C-C motif) ligand 20b
  
Possible biological names infered from orthology : CCL20 / C-C motif chemokine 20 / C-C motif chemokine ligand 20 / O89093 / P78556
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 26006730
Gene end: 26009612
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122800
Ensembl peptide - ENSDARP00000122912
swissprot - A9ZPE0
ZFIN ID - ZDB-GENE-091204-95
Ensembl - ENSDARG00000094511
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCL20ENSGALG00000003003Gallus gallus
 CCL20ENSG00000115009Homo sapiens
 Ccl20ENSMUSG00000026166Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FP236331.1 / CCL20* / P78556* / C-C motif chemokine ligand 20*ENSDARG0000011212531
ccl20a.3 / chemokine (C-C motif) ligand 20a, duplicate 3 / CCL20* / O89093* / P78556* / C-C motif chemokine 20 * / C-C motif chemokine ligand 20*ENSDARG0000010104027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000827  CC chemokine, conserved site
 IPR001811  Chemokine interleukin-8-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002548 monocyte chemotaxis IBA
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030593 neutrophil chemotaxis IBA
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0048247 lymphocyte chemotaxis IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IBA
 biological_processGO:0071346 cellular response to interferon-gamma IBA
 biological_processGO:0071347 cellular response to interleukin-1 IBA
 biological_processGO:0071356 cellular response to tumor necrosis factor IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005125 cytokine activity IEA
 molecular_functionGO:0008009 chemokine activity IBA
 molecular_functionGO:0048020 CCR chemokine receptor binding IBA


Pathways (from Reactome)
Pathway description
Chemokine receptors bind chemokines
G alpha (i) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000038968 ccr6b / chemokine (C-C motif) receptor 6b / CCR6* / P51684* / O54689* / C-C motif chemokine receptor 6* / Mus musculus chemokine (C-C motif) receptor 6 (Ccr6), transcript variant 7, mRNA.*  / complex / reaction
 ENSDARG00000087474 ccr6a / chemokine (C-C motif) receptor 6a / CCR6* / P51684* / O54689* / C-C motif chemokine receptor 6* / Mus musculus chemokine (C-C motif) receptor 6 (Ccr6), transcript variant 7, mRNA.*  / complex / reaction






 

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