ENSDARG00000098428


Danio rerio

Features
Gene ID: ENSDARG00000098428
  
Biological name :asic1c
  
Synonyms : acid-sensing (proton-gated) ion channel 1c / asic1c / Q708S6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 33868109
Gene end: 34034931
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136843
Ensembl peptide - ENSDARP00000130223
NCBI entrez gene - 407670     See in Manteia.
RefSeq - NM_214789
RefSeq Peptide - NP_999954
swissprot - A0A0R4ILG1
swissprot - Q708S6
ZFIN ID - ZDB-GENE-040513-3
Ensembl - ENSDARG00000098428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q708S7 / asic1a / acid-sensing (proton-gated) ion channel 1a / ASIC1* / P78348* / Q6NXK8* / Acid-sensing ion channel 1 * / acid sensing ion channel subunit 1*ENSDARG0000000832960
asic1b / Q708S8 / acid-sensing (proton-gated) ion channel 1bENSDARG0000010186657
asic2 / Q708S5 / acid-sensing (proton-gated) ion channel 2 / Q925H0* / Q16515* / Acid-sensing ion channel 2 * / acid sensing ion channel subunit 2*ENSDARG0000000684953
asic4a / acid-sensing (proton-gated) ion channel family member 4a / ASIC4* / Q96FT7* / acid sensing ion channel subunit family member 4*ENSDARG0000002516250
Q708S3 / asic4b / acid-sensing (proton-gated) ion channel family member 4b / ASIC4* / Q96FT7* / Q7TNS7* / Acid-sensing ion channel 4 * / acid sensing ion channel subunit family member 4*ENSDARG0000000424347
si:dkey-57c15.1 / ASIC1* / P78348* / Q6NXK8* / Acid-sensing ion channel 1 * / acid sensing ion channel subunit 1*ENSDARG0000010511520


Protein motifs (from Interpro)
Interpro ID Name
 IPR001873  Epithelial sodium channel
 IPR020903  Epithelial sodium channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0070207 protein homotrimerization ISS
 biological_processGO:0071467 cellular response to pH ISS
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IPI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005261 cation channel activity IPI
 molecular_functionGO:0005272 sodium channel activity IEA
 molecular_functionGO:0015280 ligand-gated sodium channel activity IDA
 molecular_functionGO:0044736 acid-sensing ion channel activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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