ENSDARG00000101866


Danio rerio

Features
Gene ID: ENSDARG00000101866
  
Biological name :asic1b
  
Synonyms : acid-sensing (proton-gated) ion channel 1b / asic1b / Q708S8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 7044625
Gene end: 7168571
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132694
Ensembl peptide - ENSDARP00000133845
NCBI entrez gene - 407672     See in Manteia.
RefSeq - NM_214791
RefSeq Peptide - NP_999956
swissprot - B3DGD8
swissprot - A0A0R4ID46
swissprot - Q708S8
ZFIN ID - ZDB-GENE-040513-1
Ensembl - ENSDARG00000101866
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q708S7 / asic1a / acid-sensing (proton-gated) ion channel 1a / ASIC1* / P78348* / Q6NXK8* / Acid-sensing ion channel 1 * / acid sensing ion channel subunit 1*ENSDARG0000000832957
asic1c / Q708S6 / acid-sensing (proton-gated) ion channel 1cENSDARG0000009842856
asic2 / Q708S5 / acid-sensing (proton-gated) ion channel 2 / Q925H0* / Q16515* / Acid-sensing ion channel 2 * / acid sensing ion channel subunit 2*ENSDARG0000000684951
asic4a / acid-sensing (proton-gated) ion channel family member 4a / ASIC4* / Q96FT7* / acid sensing ion channel subunit family member 4*ENSDARG0000002516247
Q708S3 / asic4b / acid-sensing (proton-gated) ion channel family member 4b / ASIC4* / Q96FT7* / Q7TNS7* / Acid-sensing ion channel 4 * / acid sensing ion channel subunit family member 4*ENSDARG0000000424345
si:dkey-57c15.1 / ASIC1* / P78348* / Q6NXK8* / Acid-sensing ion channel 1 * / acid sensing ion channel subunit 1*ENSDARG0000010511511


Protein motifs (from Interpro)
Interpro ID Name
 IPR001873  Epithelial sodium channel
 IPR004724  Epithelial sodium channel, chordates
 IPR020903  Epithelial sodium channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0070207 protein homotrimerization ISS
 biological_processGO:0071467 cellular response to pH ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005272 sodium channel activity IEA
 molecular_functionGO:0015280 ligand-gated sodium channel activity IDA
 molecular_functionGO:0044736 acid-sensing ion channel activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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