ENSDARG00000098466


Danio rerio

Features
Gene ID: ENSDARG00000098466
  
Biological name :ube2a
  
Synonyms : ube2a / ubiquitin-conjugating enzyme E2A (RAD6 homolog)
  
Possible biological names infered from orthology : P49459 / Q9Z255 / ubiquitin conjugating enzyme E2 A
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 32859430
Gene end: 32866427
  
Corresponding Affymetrix probe sets: Dr.25785.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132012
Ensembl peptide - ENSDARP00000142372
Ensembl peptide - ENSDARP00000136681
Ensembl peptide - ENSDARP00000131392
NCBI entrez gene - 797853     See in Manteia.
RefSeq - NM_201273
RefSeq - XM_009291145
RefSeq Peptide - NP_958430
swissprot - A0A140LGJ3
swissprot - Q789K9
swissprot - A0A0R4IFH4
ZFIN ID - ZDB-GENE-030616-72
Ensembl - ENSDARG00000098466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE2AENSGALG00000008648Gallus gallus
 UBE2AENSG00000077721Homo sapiens
 Ube2aENSMUSG00000016308Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube2al / ubiquitin conjugating enzyme E2 A, likeENSDARG0000000301799
ube2b / ubiquitin-conjugating enzyme E2B (RAD6 homolog)ENSDARG0000002603593


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0006281 DNA repair IBA
 biological_processGO:0016574 histone ubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0033503 HULC complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
E3 ubiquitin ligases ubiquitinate target proteins
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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