ENSDARG00000098645


Danio rerio

Features
Gene ID: ENSDARG00000098645
  
Biological name :rgn
  
Synonyms : Q6TLF6 / regucalcin / rgn
  
Possible biological names infered from orthology : Q15493 / Q64374
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 9130989
Gene end: 9139986
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130159
NCBI entrez gene - 403070     See in Manteia.
RefSeq - NM_205746
RefSeq Peptide - NP_991309
swissprot - Q6TLF6
ZFIN ID - ZDB-GENE-040718-68
Ensembl - ENSDARG00000098645
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016722Gallus gallus
 RGNENSGALG00000016724Gallus gallus
 RGNENSG00000130988Homo sapiens
 RgnENSMUSG00000023070Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005511  Senescence marker protein-30 (SMP-30)
 IPR008367  Regucalcin
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013658  SMP-30/Gluconolactonase/LRE-like region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006874 cellular calcium ion homeostasis ISS
 biological_processGO:0019853 L-ascorbic acid biosynthetic process IBA
 biological_processGO:0032781 positive regulation of ATPase activity ISS
 biological_processGO:0050848 regulation of calcium-mediated signaling ISS
 cellular_componentGO:0005576 extracellular region IBA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0004341 gluconolactonase activity IBA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030234 enzyme regulator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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