ENSDARG00000098749


Danio rerio

Features
Gene ID: ENSDARG00000098749
  
Biological name :tbcd
  
Synonyms : tbcd / tubulin folding cofactor D
  
Possible biological names infered from orthology : Q8BYA0 / Q9BTW9 / Tubulin-specific chaperone D
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 48234445
Gene end: 48327160
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139987
NCBI entrez gene - 553265     See in Manteia.
swissprot - A0A0R4IXD9
ZFIN ID - ZDB-GENE-060823-1
Ensembl - ENSDARG00000098749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBCDENSGALG00000001503Gallus gallus
 TBCDENSG00000141556Homo sapiens
 TbcdENSMUSG00000039230Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR022577  Tubulin-specific chaperone D, C-terminal
 IPR033162  Tubulin-folding cofactor D


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007021 tubulin complex assembly IEA
 biological_processGO:0007023 post-chaperonin tubulin folding pathway IEA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0010842 retina layer formation IMP
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0048487 beta-tubulin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain neuron decreased amount , abnormal
brain hydrocephalic , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0001089 myoseptum myoseptum morphology , abnormal
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 ZFA:0001094 whole organism whole organism degree of pigmentation , abnormal
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 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001117 post-vent region post-vent region increased thickness , abnormal
post-vent region shortened , abnormal
Show

 ZFA:0009114 muscle cell muscle cell disorganized , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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