ENSDARG00000098786


Danio rerio

Features
Gene ID: ENSDARG00000098786
  
Biological name :rangrf
  
Synonyms : rangrf / RAN guanine nucleotide release factor
  
Possible biological names infered from orthology : Q9HD47 / Q9JIB0
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 54280135
Gene end: 54294086
  
Corresponding Affymetrix probe sets: Dr.14890.1.S1_at (Zebrafish Array)   Dr.14890.2.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000137644
Ensembl peptide - ENSDARP00000137010
NCBI entrez gene - 559102     See in Manteia.
RefSeq - XM_005165494
RefSeq Peptide - NP_001093465
swissprot - A3KPP3
ZFIN ID - ZDB-GENE-060526-143
Ensembl - ENSDARG00000098786
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9HD47ENSG00000108961Homo sapiens
 Q9JIB0ENSMUSG00000032892Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007681  Ran-interacting Mog1 protein
 IPR016123  Mog1/PsbP, alpha/beta/alpha sandwich


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0060047 heart contraction IMP
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased amount , abnormal
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 ZFA:0005041 anterior lateral plate mesoderm anterior lateral plate mesoderm decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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