ENSDARG00000099088


Danio rerio

Features
Gene ID: ENSDARG00000099088
  
Biological name :edar
  
Synonyms : ectodysplasin A receptor / edar
  
Possible biological names infered from orthology : Q9R187 / Q9UNE0 / Tumor necrosis factor receptor superfamily member EDAR
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 56103173
Gene end: 56172757
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132540
NCBI entrez gene - 796370     See in Manteia.
RefSeq - NM_001115064
RefSeq Peptide - NP_001108536
swissprot - A0A0R4IGE7
ZFIN ID - ZDB-GENE-070117-2062
Ensembl - ENSDARG00000099088
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EDARENSGALG00000016809Gallus gallus
 EDARENSG00000135960Homo sapiens
 EdarENSMUSG00000003227Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011029  Death-like domain superfamily
 IPR034052  Tumor necrosis factor receptor EDAR, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033333 fin development IMP
 biological_processGO:0060348 bone development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000108 fin fin quality , abnormal
fin aplastic , abnormal
fin absent , abnormal
fin dermis absent , abnormal
Show

 ZFA:0000178 caudal peduncle caudal peduncle deformed , abnormal
caudal peduncle vertebra deformed , abnormal
Show

 ZFA:0000277 scale scale decreased amount , abnormal
scale aplastic , abnormal
scale absent , abnormal
Show

 ZFA:0000292 surface structure surface structure quality , abnormal
Show

 ZFA:0000356 gill raker gill raker aplastic , abnormal
gill raker decreased size , abnormal
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 ZFA:0000694 ceratobranchial 5 tooth ceratobranchial 5 tooth decreased amount , abnormal
ceratobranchial 5 tooth aplastic , abnormal
Show

 ZFA:0000737 cranium cranium shape , abnormal
Show

 ZFA:0001058 caudal fin caudal fin absent , abnormal
caudal fin mesoderm immature , abnormal
Show

 ZFA:0001094 whole organism whole organism lacks all parts of type fin , abnormal
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 ZFA:0001115 trunk trunk bent , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin absent , abnormal
Show

 ZFA:0001162 anal fin anal fin absent , abnormal
anal fin mesoderm immature , abnormal
Show

 ZFA:0001173 dorsal fin dorsal fin absent , abnormal
Show

 ZFA:0001184 pelvic fin pelvic fin absent , abnormal
Show

 ZFA:0001421 anal fin lepidotrichium anal fin lepidotrichium aplastic , abnormal
Show

 ZFA:0001550 caudal fin lepidotrichium caudal fin lepidotrichium aplastic , abnormal
Show

 ZFA:0001554 lepidotrichium lepidotrichium malformed , abnormal
Show

 ZFA:0001585 caudal fin principal ray caudal fin principal ray deformed , abnormal
caudal fin principal ray shortened , abnormal
Show

 ZFA:0001588 pectoral fin distal radial pectoral fin distal radial fused with pectoral fin distal radial , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000062289 edaradd / EDAR-associated death domain / Q8WWZ3*  / complex / reaction






 

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contact: otassy@igbmc.fr