ENSDARG00000099104


Danio rerio

Features
Gene ID: ENSDARG00000099104
  
Biological name :rpl24
  
Synonyms : ribosomal protein L24 / rpl24
  
Possible biological names infered from orthology : 60S ribosomal protein L24 / Gm17430 / P83731 / Q8BP67
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 6408
Gene end: 12027
  
Corresponding Affymetrix probe sets: Dr.1310.2.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000135555
NCBI entrez gene - 192301     See in Manteia.
swissprot - A0A0R4IMS3
ZFIN ID - ZDB-GENE-020419-25
Ensembl - ENSDARG00000099104
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL24ENSGALG00000015339Gallus gallus
 RPL24ENSG00000114391Homo sapiens
 Gm17430ENSMUSG00000091285Mus musculus
 Rpl24ENSMUSG00000098274Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000988  Ribosomal protein L24e-related
 IPR011017  TRASH domain
 IPR023442  Ribosomal protein L24e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000006 ball ball increased size , abnormal
Show

 ZFA:0000079 telencephalon telencephalon deformed , abnormal
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 ZFA:0000084 yolk yolk non-functional , abnormal
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 ZFA:0000106 extension extension decreased length , abnormal
extension decreased thickness , abnormal
extension deformed , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle opaque , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
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 ZFA:0000138 otic placode otic placode shape , abnormal
otic placode decreased size , abnormal
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 ZFA:0000445 optic tectum optic tectum increased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001117 post-vent region post-vent region bent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr