ENSMUSG00000098274


Mus musculus

Features
Gene ID: ENSMUSG00000098274
  
Biological name :Rpl24
  
Synonyms : 60S ribosomal protein L24 / Q8BP67 / Rpl24
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C1.1
Gene start: 55966275
Gene end: 55971435
  
Corresponding Affymetrix probe sets: 10386187 (MoGene1.0st)   10436232 (MoGene1.0st)   10597515 (MoGene1.0st)   1447653_x_at (Mouse Genome 430 2.0 Array)   1460201_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000023269
NCBI entrez gene - 68193     See in Manteia.
MGI - MGI:1915443
RefSeq - NM_024218
RefSeq Peptide - NP_077180
swissprot - Q8BP67
Ensembl - ENSMUSG00000098274
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl24ENSDARG00000099104Danio rerio
 RPL24ENSGALG00000015339Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm17430ENSMUSG0000009128585


Protein motifs (from Interpro)
Interpro ID Name
 IPR000988  Ribosomal protein L24e-related
 IPR011017  TRASH domain
 IPR023442  Ribosomal protein L24e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IMP
 biological_processGO:0006412 translation ISO
 biological_processGO:0007093 mitotic cell cycle checkpoint IMP
 biological_processGO:0010458 exit from mitosis IMP
 biological_processGO:0021554 optic nerve development IMP
 biological_processGO:0031290 retinal ganglion cell axon guidance IMP
 biological_processGO:0060041 retina development in camera-type eye IMP
 biological_processGO:1902626 assembly of large subunit precursor of preribosome IBA
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome ISO
 molecular_functionGO:0045296 cadherin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000373 belly spot "the appearance of a round area of white fur on the belly" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0000562 polydactyly "greater than 5 digits on one or more autopods" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0000585 kinked tail "a sharp bend or zig-zag in the tail" [J:61295]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0000592 short tail "reduced length of tail compared to control " [J:55583]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0000914 exencephaly "neurocranial defects resulting in exposure or extrusion of the brain" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001059 optic nerve atrophy "wasting of the second cranial nerve which is responsible for conveying visual information from the retina to the brain" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001286 abnormal eye development "malformation or arrest of differentiation of the visual organ" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001289 persistence of hyaloid capillary system "failure of the degeneration of the transient vascular system of the eye during development" [J:49840]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001304 cataracts "complete or partial opacity of the lens" [J:65031]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001330 abnormal optic nerve morphology "malformation, misprojection or atrophy in the second cranial nerve which is responsible for conveying visual information from the retina to the brain" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001333 absent optic nerve "absence of the second cranial nerve which is responsible for conveying visual information from the retina to the brain" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001539 decreased number of caudal vertebrae "reduced number of the bony segments of the tail" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0001698 reduced embryo size "smaller proportions of embryo compared to littermates" [J:61790]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0002110 abnormal digit morphology "abnormal development of the digits resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0002697 abnormal eye size "anomalous bulk of the organ of vision" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0002938 white spotting "the appearance of patches of white fur" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0002984 retina hypoplasia "less than normal number of cells in the thin layer of neural tissue lining the back of the eyeball which contains visual receptors" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:80994]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0003077 abnormal cell cycle "failure to progress or abnormal progression through the stages of of the cell cycle" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:91266]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0003099 retinal detachment "detachment of the retina from the underlying inner wall of the eye, often from tension of the vitreous; may occur with aging or as a result of trauma" [ava:Anna V. Anagnostopoulos, Mouse Genome Informatics Curator, J:83544]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0003711 abnormal pathological neovascularization "the proliferation of blood vessels in abnormal tissues or in abnormal positions" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0003727 abnormal retinal layer morphology "malformation in any of the layers that make up the retina" [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0003734 abnormal inner plexiform layer morphology "malformation/anomalous structure of the retinal cell layer where bipolar and amacrine cell axons synapse with ganglion cell dendrites " [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0004269 abnormal optic cup morphology "any structural anomaly of double walled stuctured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0004619 caudal vertebral fusion "the union of one or more caudal vertebrae into a single structure in species where this does not normally occur" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0004650 increased lumbar vertebrae number "increased number of the six bony segments of the spine located anterior to the sacral vertebrae and posterior to the thoracic vertebrae" [MESH:National Library of Medicine_Medical Subject Headings]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0005241 abnormal retinal ganglion layer morphology "anomalous structure of the innermost nuclear layer of the retina, which projects axons through the optic nerve to the brain " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0006042 increased apoptosis "greater than normal programmed cell death" [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: ApcMin/Apc+,Tgfbr1tm1Bopa/Tgfbr1+
Genetic Background: B6.Cg-Tgfbr1tm1Bopa ApcMin

 MP:0006069 abnormal retinal neuronal layer morphology "malformation in any of the neuronal layers that make up the retina, including the ganglion cell, inner plexiform, inner nuclear, outer plexiform, outer nuclear layers, the inner and outer segments" [smb:Susan M Bello, Mouse Genome Informatics Curator, Gray s Anatomy:ISBN 0-914294-08-3]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0006071 abnormal retinal progenitor morphology "anomoly in the proliferation or differentiation of the cells that give rise to the various cells of the retina" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:92622:]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0006221 optic nerve hypoplasia "less than the normal number of fibers in the optic nerve" [ncbi:Matthew Mailman, NCBI request, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0006243 abnormal pupil dilation reaction to light "the pupil fails to constrict fully when exposed to bright light" [ncbi:Matthew Mailman, NCBI request, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0006309 decreased retinal ganglion cell number "reduced number of ganglion neurons located in the innermost nuclear layer of the retina of that receive visual information from photoreceptors via various intermediate cells such as bipolar cells, amacrine cells, and horizontal cells; axons from these cells form the optic nerve and connect mainly to the lateral geniculate nucleus (LGN) and to the suprachiasmatic nucleus in the brain" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0008507 thin retinal ganglion layer "reduced thickness of the innermost nuclear layer of the retina, which contains neurons that project axons through the optic nerve to the brain" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0008511 thin retinal inner nuclear layer "reduced thickness of the retinal layer which contains the cell bodies of bipolar, horizontal, and amacrine cells" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0008512 disorganized retinal inner nuclear layer "derangement of the normal pattern of the retinal layer which contains the cell bodies of bipolar, horizontal, and amacrine cells" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0008516 disorganized retinal outer nuclear layer "derangement of the normal pattern of the retinal layer that contains the nuclei and cell bodies of rods and cones" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0008852 retinal neovascularization "formation of new blood vessels originating from the retinal veins and extending along the inner (vitreal) surface of the retina" [MESH:C11.768.725]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0010717 coloboma of the optic nerve "congenital defect of the optic nerve in which some part of the structure is absent" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0011092 complete embryonic lethality "death of all organisms of a given genotype in a population within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
Show

Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0011102 partial embryonic lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

 MP:0012536 delayed optic fissure closure "late onset of the initiation and/or completion of closure of the transient gap in the ventral margin of the developing optic cup; fusion of the optic fissure begins with apposition of the inferior lips of the ventral-most optic cup and continues anteriorly toward its rim and posteriorly along the optic stalk" [MGI:anna]
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Allelic Composition: Gsdma3Bsk/Gsdma3Bsk
Genetic Background: Not Specified

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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