ENSDARG00000099139


Danio rerio

Features
Gene ID: ENSDARG00000099139
  
Biological name :fbxw5
  
Synonyms : F-box and WD repeat domain containing 5 / fbxw5
  
Possible biological names infered from orthology : Mus musculus F-box and WD-40 domain protein 5 (Fbxw5), transcript variant 3, mRNA. / Q969U6 / Q9QXW2
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 54446262
Gene end: 54482245
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143779
Ensembl peptide - ENSDARP00000141973
NCBI entrez gene - 406611     See in Manteia.
RefSeq - NM_213319
RefSeq Peptide - NP_998484
swissprot - A0A286Y9Z1
swissprot - Q6PFV0
ZFIN ID - ZDB-GENE-040426-2571
Ensembl - ENSDARG00000099139
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBXW5ENSGALG00000030831Gallus gallus
 FBXW5ENSG00000159069Homo sapiens
 Fbxw5ENSMUSG00000015095Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR001810  F-box domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010824 regulation of centrosome duplication ISS
 biological_processGO:0016567 protein ubiquitination ISS
 biological_processGO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISS
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process ISS
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0019005 SCF ubiquitin ligase complex ISS
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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