ENSDARG00000099624


Danio rerio

Features
Gene ID: ENSDARG00000099624
  
Biological name :chmp1b
  
Synonyms : chmp1b / chromatin modifying protein 1B / Q7ZVB1
  
Possible biological names infered from orthology : 2610002M06Rik / charged multivesicular body protein 1B / Charged multivesicular body protein 1b-1 / Charged multivesicular body protein 1b-2 / Q7LBR1 / Q99LU0 / Q9CQD4
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 23024033
Gene end: 23028214
  
Corresponding Affymetrix probe sets: Dr.8435.1.S1_at (Zebrafish Array)   NM_200014_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134015
NCBI entrez gene - 336426     See in Manteia.
RefSeq - NM_200014
RefSeq Peptide - NP_956308
swissprot - A8E581
swissprot - Q7ZVB1
ZFIN ID - ZDB-GENE-030131-8370
Ensembl - ENSDARG00000099624
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHMP1BENSGALG00000040746Gallus gallus
 CHMP1BENSG00000255112Homo sapiens
 Chmp1bENSMUSG00000109901Mus musculus
 Q9CQD4ENSMUSG00000031242Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chmp1a / charged multivesicular body protein 1A / Q921W0* / Q9HD42*ENSDARG0000010264352


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr