ENSDARG00000099742


Danio rerio

Features
Gene ID: ENSDARG00000099742
  
Biological name :heatr1
  
Synonyms : heatr1 / HEAT repeat containing 1
  
Possible biological names infered from orthology : Q9H583
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 9619909
Gene end: 9700605
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131597
NCBI entrez gene - 334446     See in Manteia.
RefSeq - NM_199900
RefSeq - XM_009306489
RefSeq Peptide - NP_956194
swissprot - A0A0R4IAU8
ZFIN ID - ZDB-GENE-030131-6378
Ensembl - ENSDARG00000099742
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HEATR1ENSGALG00000032799Gallus gallus
 HEATR1ENSG00000119285Homo sapiens
 Heatr1ENSMUSG00000050244Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR012954  BP28, C-terminal domain
 IPR016024  Armadillo-type fold
 IPR022125  U3 small nucleolar RNA-associated protein 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
brain quality , abnormal
brain neuron necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary quality , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
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 ZFA:0000243 neuromast neuromast decreased amount , abnormal
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 ZFA:0001114 head head flat , abnormal
head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
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 ZFA:0001469 lateral line lateral line truncated , abnormal
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 ZFA:0005237 erythroblast erythroblast decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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