ENSDARG00000100304


Danio rerio

Features
Gene ID: ENSDARG00000100304
  
Biological name :chdh
  
Synonyms : chdh / choline dehydrogenase
  
Possible biological names infered from orthology : Choline dehydrogenase, mitochondrial / Q8BJ64 / Q8NE62
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 53474755
Gene end: 53490376
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133553
Ensembl peptide - ENSDARP00000151847
NCBI entrez gene - 100331020     See in Manteia.
swissprot - E7EY13
ZFIN ID - ZDB-GENE-120111-1
Ensembl - ENSDARG00000100304
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHDHENSGALG00000005363Gallus gallus
 CHDHENSG00000016391Homo sapiens
 ChdhENSMUSG00000015970Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000172  Glucose-methanol-choline oxidoreductase, N-terminal
 IPR007867  Glucose-methanol-choline oxidoreductase, C-terminal
 IPR011533  Oxygen-dependent choline dehydrogenase
 IPR012132  Glucose-methanol-choline oxidoreductase
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019285 glycine betaine biosynthetic process from choline IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0008812 choline dehydrogenase activity IEA
 molecular_functionGO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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