ENSDARG00000100535


Danio rerio

Features
Gene ID: ENSDARG00000100535
  
Biological name :ecm1a
  
Synonyms : ecm1a / extracellular matrix protein 1a
  
Possible biological names infered from orthology : ECM1 / extracellular matrix protein 1 / Mus musculus extracellular matrix protein 1 (Ecm1), transcript variant 3, mRNA. / Q16610 / Q61508
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 10917602
Gene end: 10920577
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137189
NCBI entrez gene - 100536787     See in Manteia.
swissprot - A0A0R4IMZ6
ZFIN ID - ZDB-GENE-121204-1
Ensembl - ENSDARG00000100535
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ECM1ENSG00000143369Homo sapiens
 Ecm1ENSMUSG00000028108Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ecm1b / extracellular matrix protein 1b / ECM1* / Q16610* / Q61508* / extracellular matrix protein 1* / Mus musculus extracellular matrix protein 1 (Ecm1), transcript variant 3, mRNA.*ENSDARG0000010523931


Protein motifs (from Interpro)
Interpro ID Name
 IPR008605  Extracellular matrix protein 1
 IPR020858  Serum albumin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr