ENSDARG00000100564


Danio rerio

Features
Gene ID: ENSDARG00000100564
  
Biological name :sil1
  
Synonyms : sil1 / SIL1 nucleotide exchange factor
  
Possible biological names infered from orthology : Nucleotide exchange factor SIL1 / Q9EPK6 / Q9H173
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 38795518
Gene end: 38809561
  
Corresponding Affymetrix probe sets: Dr.18386.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130483
NCBI entrez gene - 568308     See in Manteia.
RefSeq - XM_009291221
RefSeq - XM_021481244
swissprot - A0A0G2KDW7
ZFIN ID - ZDB-GENE-160113-49
Ensembl - ENSDARG00000100564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SIL1ENSGALG00000002457Gallus gallus
 SIL1ENSG00000120725Homo sapiens
 Sil1ENSMUSG00000024357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR013918  Nucleotide exchange factor Fes1
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0048741 skeletal muscle fiber development IMP
 cellular_componentGO:0005783 endoplasmic reticulum IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
eye decreased diameter , abnormal
Show

 ZFA:0001089 myoseptum myoseptum morphology , abnormal
myoseptum spatial pattern , abnormal
Show

 ZFA:0005277 skeletal muscle skeletal muscle morphology , abnormal
skeletal muscle refractivity , abnormal
Show

 ZFA:0009071 Purkinje cell Purkinje cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr