ENSDARG00000101082


Danio rerio

Features
Gene ID: ENSDARG00000101082
  
Biological name :eif3s6ip
  
Synonyms : eif3s6ip / eukaryotic translation initiation factor 3, subunit 6 interacting protein / Q7T2A5
  
Possible biological names infered from orthology : EIF3L / eukaryotic translation initiation factor 3 subunit L / Q8QZY1 / Q9Y262
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 43223491
Gene end: 43238578
  
Corresponding Affymetrix probe sets: Dr.4265.1.A1_at (Zebrafish Array)   NM_213128_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134724
NCBI entrez gene - 406402     See in Manteia.
RefSeq - NM_213128
RefSeq Peptide - NP_998293
swissprot - Q7T2A5
ZFIN ID - ZDB-GENE-040426-2138
Ensembl - ENSDARG00000101082
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3LENSGALG00000012296Gallus gallus
 EIF3LENSG00000100129Homo sapiens
 Eif3lENSMUSG00000033047Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019382  Translation initiation factor 3 complex subunit L


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 molecular_functionGO:0003743 translation initiation factor activity IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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