ENSDARG00000101144


Danio rerio

Features
Gene ID: ENSDARG00000101144
  
Biological name :zdhhc13
  
Synonyms : zdhhc13 / zinc finger, DHHC-type containing 13
  
Possible biological names infered from orthology : Q8IUH4 / Q9CWU2 / zinc finger, DHHC domain containing 13
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 16509201
Gene end: 16549089
  
Corresponding Affymetrix probe sets: Dr.2373.1.A1_at (Zebrafish Array)   Dr.6653.1.A1_at (Zebrafish Array)   NM_001008650_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142710
Ensembl peptide - ENSDARP00000142901
NCBI entrez gene - 494107     See in Manteia.
RefSeq - NM_001008650
RefSeq Peptide - NP_001008650
swissprot - A0A1D5NST3
swissprot - A0A0R4IQZ2
ZFIN ID - ZDB-GENE-041212-79
Ensembl - ENSDARG00000101144
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZDHHC13ENSGALG00000004085Gallus gallus
 Q8IUH4ENSG00000177054Homo sapiens
 Q9CWU2ENSMUSG00000030471Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zdhhc17 / zinc finger, DHHC-type containing 17 / Q80TN5* / Q8IUH5* / zinc finger, DHHC domain containing 17*ENSDARG0000007044142
si:ch211-223a10.1ENSDARG0000007522516
zdhhc12b / zinc finger, DHHC-type containing 12b / Q96GR4* / Q8VC90* / ZDHHC12* / zinc finger DHHC-type containing 12* / zinc finger, DHHC domain containing 12*ENSDARG0000005278710
zdhhc12a / zinc finger, DHHC-type containing 12a / Q96GR4* / Q8VC90* / ZDHHC12* / zinc finger DHHC-type containing 12* / zinc finger, DHHC domain containing 12*ENSDARG0000007663210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001594  Palmitoyltransferase, DHHC domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR030290  Palmitoyltransferase ZDHHC13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030510 regulation of BMP signaling pathway IMP
 biological_processGO:0042665 regulation of ectodermal cell fate specification IMP
 biological_processGO:0060803 BMP signaling pathway involved in mesodermal cell fate specification IMP
 biological_processGO:1903830 magnesium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015095 magnesium ion transmembrane transporter activity IEA
 molecular_functionGO:0016409 palmitoyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0019706 protein-cysteine S-palmitoyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain increased size , abnormal
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 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
anatomical structure decreased amount , abnormal
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 ZFA:0000041 mesoderm mesoderm dorsal region increased distribution , abnormal
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 ZFA:0000114 heart heart decreased functionality , abnormal
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 ZFA:0000155 somite somite distended , abnormal
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 ZFA:0001069 ventral fin fold ventral fin fold decreased thickness , abnormal
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 ZFA:0001114 head head increased size , abnormal
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 ZFA:0001120 neuroectoderm neuroectoderm increased distribution , abnormal
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 ZFA:0001376 presumptive ectoderm presumptive ectoderm ventral region decreased distribution , abnormal
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 ZFA:0001714 presumptive ventral mesoderm presumptive ventral mesoderm decreased distribution , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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