ENSDARG00000101706


Danio rerio

Features
Gene ID: ENSDARG00000101706
  
Biological name :csrp3
  
Synonyms : csrp3 / cysteine and glycine-rich protein 3 (cardiac LIM protein)
  
Possible biological names infered from orthology : cysteine and glycine rich protein 3 / P50461 / P50462
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 16548219
Gene end: 16562202
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138514
Ensembl peptide - ENSDARP00000139671
Ensembl peptide - ENSDARP00000142983
NCBI entrez gene - 450005     See in Manteia.
RefSeq - NM_001006026
RefSeq - NM_001320091
RefSeq Peptide - NP_001006026
RefSeq Peptide - NP_001307020
swissprot - F1QJC0
ZFIN ID - ZDB-GENE-041010-119
Ensembl - ENSDARG00000101706
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRP3ENSGALG00000004044Gallus gallus
 CSRP3ENSG00000129170Homo sapiens
 Csrp3ENSMUSG00000030470Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csrp2 / cysteine and glycine-rich protein 2 / P97314* / Q16527*ENSDARG0000001196168
csrp1a / cysteine and glycine-rich protein 1a / CSRP1* / P21291* / P97315* / cysteine and glycine rich protein 1*ENSDARG0000000660366
csrp1b / cysteine and glycine-rich protein 1b / CSRP1* / P21291* / cysteine and glycine rich protein 1*ENSDARG0000003098064
zgc:101840 / CRIP2* / P52943* / Q9DCT8* / cysteine rich protein 2*ENSDARG0000003320137
crip2 / cysteine-rich protein 2 / P52943* / Q9DCT8*ENSDARG0000007067037
crip3 / cysteine-rich protein 3ENSDARG0000004339534
crip1 / cysteine-rich protein 1 / P50238* / P63254* / AL928654.3*ENSDARG0000005385816
zgc:195282 / CRIP3* / Q6Q6R3* / Q6Q6R5* / cysteine rich protein 3*ENSDARG0000007948811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045214 sarcomere organization IMP
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart decreased contractility , abnormal
Show

 ZFA:0000154 sinus venosus sinus venosus increased accumulation blood , abnormal
Show

 ZFA:0005280 cardiac muscle cardiac muscle Z disc increased width , abnormal
cardiac muscle Z disc disorganized , abnormal
Show

 ZFA:0009316 cardiac muscle cell cardiac muscle cell sarcomere decreased thickness , abnormal
cardiac muscle cell sarcomere decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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