ENSDARG00000102294


Danio rerio

Features
Gene ID: ENSDARG00000102294
  
Biological name :fbxo11a
  
Synonyms : F-box protein 11a / fbxo11a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 48381035
Gene end: 48431911
  
Corresponding Affymetrix probe sets: Dr.15421.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134594
Ensembl peptide - ENSDARP00000155828
Ensembl peptide - ENSDARP00000140781
Ensembl peptide - ENSDARP00000134626
NCBI entrez gene - 777607     See in Manteia.
swissprot - A0A0R4IXA1
swissprot - A0A0R4IL43
swissprot - A0A0R4IJR2
ZFIN ID - ZDB-GENE-061103-70
Ensembl - ENSDARG00000102294
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxo11a / F-box protein 11a / FBXO11* / Q7TPD1* / Q86XK2* / F-box protein 11* / Mus musculus F-box protein 11 (Fbxo11), transcript variant 2, mRNA.*ENSDARG0000006163196
fbxo10 / F-box protein 10 / Q7TQF2* / Q9UK96* / F-box only protein 10 *ENSDARG0000006193620


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR003126  Zinc finger, UBR-type
 IPR006626  Parallel beta-helix repeat
 IPR006633  Carbohydrate-binding/sugar hydrolysis domain
 IPR007742  Periplasmic copper-binding protein NosD, beta helix domain
 IPR011050  Pectin lyase fold/virulence factor
 IPR012334  Pectin lyase fold
 IPR022441  Parallel beta-helix repeat-2
 IPR029799  F-box only protein 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr