ENSDARG00000061631


Danio rerio

Features
Gene ID: ENSDARG00000061631
  
Biological name :fbxo11a
  
Synonyms : F-box protein 11a / fbxo11a
  
Possible biological names infered from orthology : F-box protein 11 / FBXO11 / Mus musculus F-box protein 11 (Fbxo11), transcript variant 2, mRNA. / Q7TPD1 / Q86XK2
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 24841719
Gene end: 24904944
  
Corresponding Affymetrix probe sets: Dr.12361.1.S1_at (Zebrafish Array)   Dr.13073.1.S1_at (Zebrafish Array)   XM_691042_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127104
NCBI entrez gene - 567742     See in Manteia.
RefSeq - XM_009306739
RefSeq - XM_021472548
RefSeq - XM_021472549
RefSeq - XM_005156232
RefSeq - XM_021480325
RefSeq - XM_691042
RefSeq - XM_021472551
RefSeq - XM_021480324
swissprot - U3JA39
ZFIN ID - ZDB-GENE-061103-70
Ensembl - ENSDARG00000061631
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBXO11ENSGALG00000008944Gallus gallus
 FBXO11ENSG00000138081Homo sapiens
 Fbxo11ENSMUSG00000005371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxo11a / F-box protein 11aENSDARG0000010229493
fbxo10 / F-box protein 10 / Q7TQF2* / Q9UK96* / F-box only protein 10 *ENSDARG0000006193619


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR003126  Zinc finger, UBR-type
 IPR006626  Parallel beta-helix repeat
 IPR006633  Carbohydrate-binding/sugar hydrolysis domain
 IPR011050  Pectin lyase fold/virulence factor
 IPR012334  Pectin lyase fold
 IPR022441  Parallel beta-helix repeat-2
 IPR029799  F-box only protein 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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