ENSDARG00000102377


Danio rerio

Features
Gene ID: ENSDARG00000102377
  
Biological name :slc6a16b
  
Synonyms : slc6a16b / solute carrier family 6, member 16b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 38618502
Gene end: 38644937
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132184
NCBI entrez gene - 567809     See in Manteia.
RefSeq - NM_001110474
RefSeq Peptide - NP_001103944
swissprot - F1Q9B5
ZFIN ID - ZDB-GENE-070424-95
Ensembl - ENSDARG00000102377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a16a / solute carrier family 6, member 16aENSDARG0000000712965
slc6a15 / solute carrier family 6 (neutral amino acid transporter), member 15 / Q9H2J7* / Q8BG16* / solute carrier family 6 member 15* / Sodium-dependent neutral amino acid transporter B(0)AT2 *ENSDARG0000006282152
slc6a17 / solute carrier family 6 (neutral amino acid transporter), member 17 / Q9H1V8* / Q8BJI1* / solute carrier family 6 member 17* / Sodium-dependent neutral amino acid transporter SLC6A17 *ENSDARG0000006878750
slc6a19b / solute carrier family 6 (neutral amino acid transporter), member 19b / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier family 6 (neurotransmitt...ENSDARG0000005671937
slc6a19a.1 / solute carrier family 6 (neutral amino acid transporter), member 19a, tandem duplicate 1 / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier fa...ENSDARG0000001862137
slc6a19a.2 / solute carrier family 6 (neutral amino acid transporter), member 19a, tandem duplicate 2 / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier fa...ENSDARG0000009156037
slc6a18 / solute carrier family 6 (neutral amino acid transporter), member 18 / Q96N87* / O88576* / solute carrier family 6 member 18* / solute carrier family 6 (neurotransmitter transporte...ENSDARG0000006838736
si:ch211-225b11.1ENSDARG0000000240528
si:ch211-283g2.1ENSDARG0000004609127
si:ch211-132b12.4ENSDARG000000929307


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IEA
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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