ENSDARG00000068787


Danio rerio

Features
Gene ID: ENSDARG00000068787
  
Biological name :slc6a17
  
Synonyms : slc6a17 / solute carrier family 6 (neutral amino acid transporter), member 17
  
Possible biological names infered from orthology : Q8BJI1 / Q9H1V8 / Sodium-dependent neutral amino acid transporter SLC6A17 / solute carrier family 6 member 17
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 24854600
Gene end: 24890992
  
Corresponding Affymetrix probe sets: Dr.16965.1.S1_at (Zebrafish Array)   Dr.22804.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000128592
Ensembl peptide - ENSDARP00000090381
NCBI entrez gene - 798635     See in Manteia.
RefSeq - NM_001256724
RefSeq Peptide - NP_001243653
swissprot - A5WUQ3
swissprot - X1WEE1
ZFIN ID - ZDB-GENE-030131-8187
Ensembl - ENSDARG00000068787
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC6A17ENSGALG00000000394Gallus gallus
 Q9H1V8ENSG00000197106Homo sapiens
 Q8BJI1ENSMUSG00000027894Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a15 / solute carrier family 6 (neutral amino acid transporter), member 15 / Q9H2J7* / Q8BG16* / solute carrier family 6 member 15* / Sodium-dependent neutral amino acid transporter B(0)AT2 *ENSDARG0000006282164
slc6a16a / solute carrier family 6, member 16aENSDARG0000000712948
slc6a16b / solute carrier family 6, member 16bENSDARG0000010237747
slc6a19a.2 / solute carrier family 6 (neutral amino acid transporter), member 19a, tandem duplicate 2 / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier fa...ENSDARG0000009156036
slc6a19b / solute carrier family 6 (neutral amino acid transporter), member 19b / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier family 6 (neurotransmitt...ENSDARG0000005671936
slc6a18 / solute carrier family 6 (neutral amino acid transporter), member 18 / Q96N87* / O88576* / solute carrier family 6 member 18* / solute carrier family 6 (neurotransmitter transporte...ENSDARG0000006838735
slc6a19a.1 / solute carrier family 6 (neutral amino acid transporter), member 19a, tandem duplicate 1 / Q9D687* / Q695T7* / SLC6A19* / solute carrier family 6 member 19* / solute carrier fa...ENSDARG0000001862134
si:ch211-283g2.1ENSDARG0000004609127
si:ch211-225b11.1ENSDARG0000000240526
si:ch211-132b12.4ENSDARG000000929306


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002438  Sodium:neurotransmitter symporter, orphan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IEA
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0015816 glycine transport IBA
 biological_processGO:0015820 leucine transport IBA
 biological_processGO:0015824 proline transport IBA
 biological_processGO:0032328 alanine transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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