ENSGALG00000000394


Gallus gallus

Features
Gene ID: ENSGALG00000000394
  
Biological name :SLC6A17
  
Synonyms : SLC6A17 / solute carrier family 6 member 17
  
Possible biological names infered from orthology : Q8BJI1 / Q9H1V8 / Sodium-dependent neutral amino acid transporter SLC6A17
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 1342526
Gene end: 1349149
  
Corresponding Affymetrix probe sets: GgaAffx.254.1.S1_s_at (Chicken Array)   GgaAffx.254.2.S1_at (Chicken Array)   GgaAffx.254.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000538
NCBI entrez gene - 419805     See in Manteia.
RefSeq - XM_015299149
RefSeq - XM_015299150
RefSeq - XM_015299151
RefSeq - XM_417942
RefSeq - XM_015299148
swissprot - F1NS02
Ensembl - ENSGALG00000000394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc6a17ENSDARG00000068787Danio rerio
 Q9H1V8ENSG00000197106Homo sapiens
 Q8BJI1ENSMUSG00000027894Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC6A15 / solute carrier family 6 member 15 / Q8BG16* / Q9H2J7* / Sodium-dependent neutral amino acid transporter B(0)AT2 *ENSGALG0000001099270
SLC6A19 / solute carrier family 6 member 19 / Q695T7* / Q9D687* / solute carrier family 6 (neurotransmitter transporter), member 19*ENSGALG0000001952735
SLC6A20 / solute carrier family 6 member 20 / Q9NP91* / O88575* / Q8VDB9* / Slc6a20b* / Slc6a20a* / Sodium- and chloride-dependent transporter XTRP3B * / Sodium- and chloride-dependent tran...ENSGALG0000003933335
SLC6A18 / solute carrier family 6 member 18 / O88576* / Q96N87* / solute carrier family 6 (neurotransmitter transporter), member 18*ENSGALG0000001318034
ENSGALG0000003716312


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002438  Sodium:neurotransmitter symporter, orphan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IEA
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0015816 glycine transport IBA
 biological_processGO:0015820 leucine transport IBA
 biological_processGO:0015824 proline transport IBA
 biological_processGO:0032328 alanine transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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