ENSGALG00000039333


Gallus gallus

Features
Gene ID: ENSGALG00000039333
  
Biological name :SLC6A20
  
Synonyms : SLC6A20 / solute carrier family 6 member 20
  
Possible biological names infered from orthology : O88575 / Q8VDB9 / Q9NP91 / Slc6a20a / Slc6a20b / Sodium- and chloride-dependent transporter XTRP3A / Sodium- and chloride-dependent transporter XTRP3B
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 42970198
Gene end: 42981414
  
Corresponding Affymetrix probe sets: GgaAffx.7519.2.S1_at (Chicken Array)   GgaAffx.7519.2.S1_s_at (Chicken Array)   GgaAffx.7519.3.S1_at (Chicken Array)   GgaAffx.7519.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051933
NCBI entrez gene - 420699     See in Manteia.
RefSeq - XM_418798
swissprot - A0A1D5PGL0
Ensembl - ENSGALG00000039333
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9NP91ENSG00000163817Homo sapiens
 O88575ENSMUSG00000025243Mus musculus
 Q8VDB9ENSMUSG00000036814Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC6A18 / solute carrier family 6 member 18 / O88576* / Q96N87* / solute carrier family 6 (neurotransmitter transporter), member 18*ENSGALG0000001318045
SLC6A19 / solute carrier family 6 member 19 / Q695T7* / Q9D687* / solute carrier family 6 (neurotransmitter transporter), member 19*ENSGALG0000001952744
SLC6A15 / solute carrier family 6 member 15 / Q8BG16* / Q9H2J7* / Sodium-dependent neutral amino acid transporter B(0)AT2 *ENSGALG0000001099239
SLC6A17 / solute carrier family 6 member 17 / Q8BJI1* / Q9H1V8* / Sodium-dependent neutral amino acid transporter SLC6A17 *ENSGALG0000000039439
ENSGALG0000003716314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002438  Sodium:neurotransmitter symporter, orphan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0006865 amino acid transport IEA
 biological_processGO:0015816 glycine transport IEA
 biological_processGO:0015824 proline transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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