ENSMUSG00000036814


Mus musculus

Features
Gene ID: ENSMUSG00000036814
  
Biological name :Slc6a20a
  
Synonyms : Q8VDB9 / Slc6a20a / Sodium- and chloride-dependent transporter XTRP3A
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F4
Gene start: 123634770
Gene end: 123678885
  
Corresponding Affymetrix probe sets: 10597960 (MoGene1.0st)   1427221_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000129107
Ensembl peptide - ENSMUSP00000132700
Ensembl peptide - ENSMUSP00000047690
NCBI entrez gene - 102680     See in Manteia.
MGI - MGI:2143217
RefSeq - NM_139142
RefSeq Peptide - NP_631881
swissprot - Q8VDB9
swissprot - E9Q0H0
swissprot - F6WK13
Ensembl - ENSMUSG00000036814
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC6A20ENSGALG00000039333Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O88575 / Slc6a20b / Sodium- and chloride-dependent transporter XTRP3B / Q9NP91* / SLC6A20* / solute carrier family 6 member 20*ENSMUSG0000002524390
Q9D687 / Slc6a19 / solute carrier family 6 (neurotransmitter transporter), member 19 / Q695T7* / solute carrier family 6 member 19*ENSMUSG0000002156547
O88576 / Slc6a18 / solute carrier family 6 (neurotransmitter transporter), member 18 / Q96N87* / solute carrier family 6 member 18*ENSMUSG0000002161247
Q8BG16 / Slc6a15 / Sodium-dependent neutral amino acid transporter B(0)AT2 / Q9H2J7* / solute carrier family 6 member 15*ENSMUSG0000001989443
Q8BJI1 / Slc6a17 / Sodium-dependent neutral amino acid transporter SLC6A17 / Q9H1V8* / solute carrier family 6 member 17*ENSMUSG0000002789443
Slc6a16 / Q9GZN6* / solute carrier family 6 member 16*ENSMUSG0000009415229
Slc6a21ENSMUSG0000007056812


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002438  Sodium:neurotransmitter symporter, orphan
 IPR037272  Sodium:neurotransmitter symporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0006865 amino acid transport IEA
 biological_processGO:0015816 glycine transport ISO
 biological_processGO:0015824 proline transport ISO
 biological_processGO:0015838 amino-acid betaine transport IDA
 biological_processGO:0035524 proline transmembrane transport IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IDA
 molecular_functionGO:0015193 L-proline transmembrane transporter activity IDA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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