ENSDARG00000102443


Danio rerio

Features
Gene ID: ENSDARG00000102443
  
Biological name :si:ch1073-450f2.1
  
Synonyms : si:ch1073-450f2.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 50880096
Gene end: 50911958
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141304
Ensembl peptide - ENSDARP00000143051
Ensembl peptide - ENSDARP00000144767
Ensembl peptide - ENSDARP00000130491
swissprot - A0A0G2L938
swissprot - A0A0R4ICT7
swissprot - A0A1L1QZC9
ZFIN ID - ZDB-GENE-120215-55
Ensembl - ENSDARG00000102443
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shank2 / SH3 and multiple ankyrin repeat domains 2 / Q80Z38* / Q9UPX8* / SH3 and multiple ankyrin repeat domains protein 2 *ENSDARG0000006232548
shank3b / SH3 and multiple ankyrin repeat domains 3b / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006305430
shank3a / SH3 and multiple ankyrin repeat domains 3a / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006333229
shank1 / SH3 and multiple ankyrin repeat domains 1 / D3YZU1* / Q9Y566* / SH3 and multiple ankyrin repeat domains protein 1 *ENSDARG0000006053914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001660  Sterile alpha motif domain
 IPR002110  Ankyrin repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR020683  Ankyrin repeat-containing domain
 IPR032425  Talin, N-terminal F0 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr