ENSDARG00000102607


Danio rerio

Features
Gene ID: ENSDARG00000102607
  
Biological name :pmpca
  
Synonyms : peptidase (mitochondrial processing) alpha / pmpca
  
Possible biological names infered from orthology : peptidase, mitochondrial processing alpha subunit / Q10713 / Q9DC61
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 65040228
Gene end: 65062719
  
Corresponding Affymetrix probe sets: Dr.24242.1.A1_at (Zebrafish Array)   Dr.24242.2.S1_at (Zebrafish Array)   NM_001007442_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132105
NCBI entrez gene - 492801     See in Manteia.
RefSeq - NM_001007442
RefSeq Peptide - NP_001007443
swissprot - A0A0R4IFK9
ZFIN ID - ZDB-GENE-030131-5809
Ensembl - ENSDARG00000102607
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PMPCAENSGALG00000001950Gallus gallus
 PMPCAENSG00000165688Homo sapiens
 PmpcaENSMUSG00000026926Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
uqcrc2b / ubiquinol-cytochrome c reductase core protein 2b / P22695* / Q9DB77* / UQCRC2* / ubiquinol-cytochrome c reductase core protein 2*ENSDARG0000007169122
uqcrc2a / ubiquinol-cytochrome c reductase core protein 2a / P22695* / UQCRC2* / ubiquinol-cytochrome c reductase core protein 2*ENSDARG0000001479421


Protein motifs (from Interpro)
Interpro ID Name
 IPR001431  Peptidase M16, zinc-binding site
 IPR007863  Peptidase M16, C-terminal
 IPR011249  Metalloenzyme, LuxS/M16 peptidase-like
 IPR011765  Peptidase M16, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006627 protein processing involved in protein targeting to mitochondrion IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Processing of SMDT1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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