ENSDARG00000102636


Danio rerio

Features
Gene ID: ENSDARG00000102636
  
Biological name :trmt9b
  
Synonyms : trmt9b / tRNA methyltransferase 9B
  
Possible biological names infered from orthology : 6430573F11Rik / Probable tRNA methyltransferase 9-like protein / Q80WQ4 / Q9P272 / tRNA methyltransferase 9B (putative)
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 33702918
Gene end: 33734112
  
Corresponding Affymetrix probe sets: Dr.7313.1.A1_at (Zebrafish Array)   Dr.7313.2.S1_at (Zebrafish Array)   NM_199743_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000138100
Ensembl peptide - ENSDARP00000138241
NCBI entrez gene - 326652     See in Manteia.
RefSeq - NM_199743
RefSeq Peptide - NP_956037
swissprot - A0A0R4IVE8
swissprot - A0A0R4IST8
ZFIN ID - ZDB-GENE-030131-4851
Ensembl - ENSDARG00000102636
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT9BENSGALG00000042726Gallus gallus
 Q9P272ENSG00000250305Homo sapiens
 Q80WQ4ENSMUSG00000039620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
alkbh8 / alkB homolog 8, tRNA methyltransferase / Q80Y20* / Q96BT7* / Alkylated DNA repair 8 *ENSDARG0000006025622


Protein motifs (from Interpro)
Interpro ID Name
 IPR013216  Methyltransferase type 11
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR032873  Probable tRNA methyltransferase 9-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0032259 methylation IEA
 molecular_functionGO:0008168 methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr