ENSG00000250305


Homo sapiens

Features
Gene ID: ENSG00000250305
  
Biological name :TRMT9B
  
Synonyms : Q9P272 / TRMT9B / tRNA methyltransferase 9B (putative)
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p22
Gene start: 12945642
Gene end: 13031503
  
Corresponding Affymetrix probe sets: 1558541_at (Human Genome U133 Plus 2.0 Array)   214796_at (Human Genome U133 Plus 2.0 Array)   238770_at (Human Genome U133 Plus 2.0 Array)   239297_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431717
Ensembl peptide - ENSP00000443288
Ensembl peptide - ENSP00000466330
Ensembl peptide - ENSP00000468715
Ensembl peptide - ENSP00000432695
NCBI entrez gene - 57604     See in Manteia.
OMIM - 615666
RefSeq - XM_017013714
RefSeq - XM_017013707
RefSeq - XM_017013708
RefSeq - XM_017013709
RefSeq - XM_017013710
RefSeq - XM_017013711
RefSeq - XM_017013713
RefSeq - NM_001099677
RefSeq - NM_020844
RefSeq - XM_005273584
RefSeq - XM_005273585
RefSeq - XM_005273586
RefSeq - XM_005273587
RefSeq - XM_005273588
RefSeq - XM_005273590
RefSeq - XM_005273591
RefSeq - XM_011544596
RefSeq - XM_011544597
RefSeq - XM_011544598
RefSeq - XM_011544600
RefSeq - XM_011544601
RefSeq - XM_017013705
RefSeq - XM_017013706
RefSeq Peptide - NP_001093147
RefSeq Peptide - NP_065895
swissprot - F6XBY7
swissprot - K7EM26
swissprot - Q9P272
swissprot - E9PK20
Ensembl - ENSG00000250305
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt9bENSDARG00000102636Danio rerio
 TRMT9BENSGALG00000042726Gallus gallus
 Q80WQ4ENSMUSG00000039620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ALKBH8 / Q96BT7 / alkB homolog 8, tRNA methyltransferaseENSG0000013776024


Protein motifs (from Interpro)
Interpro ID Name
 IPR013216  Methyltransferase type 11
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR032873  Probable tRNA methyltransferase 9-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IBA
 biological_processGO:0006400 tRNA modification TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm TAS
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity EXP
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0016300 tRNA (uracil) methyltransferase activity IBA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
tRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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