ENSDARG00000103173


Danio rerio

Features
Gene ID: ENSDARG00000103173
  
Biological name :stx8
  
Synonyms : stx8 / syntaxin 8
  
Possible biological names infered from orthology : O88983 / Q9UNK0
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 19689464
Gene end: 19802580
  
Corresponding Affymetrix probe sets: Dr.15516.1.S1_at (Zebrafish Array)   NM_200375_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000139377
Ensembl peptide - ENSDARP00000132359
NCBI entrez gene - 393346     See in Manteia.
RefSeq - NM_200375
RefSeq Peptide - NP_956669
swissprot - A0A0R4IH18
swissprot - Q7T361
ZFIN ID - ZDB-GENE-040426-1360
Ensembl - ENSDARG00000103173
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX8ENSGALG00000001238Gallus gallus
 STX8ENSG00000170310Homo sapiens
 Stx8ENSMUSG00000020903Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IDA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr