ENSDARG00000103433


Danio rerio

Features
Gene ID: ENSDARG00000103433
  
Biological name :rpl14
  
Synonyms : ribosomal protein L14 / rpl14
  
Possible biological names infered from orthology : 60S ribosomal protein L14 / P50914 / Q9CR57
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 48364312
Gene end: 48371092
  
Corresponding Affymetrix probe sets: Dr.895.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000140879
swissprot - A8E526
ZFIN ID - ZDB-GENE-030131-2085
Ensembl - ENSDARG00000103433
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043379Gallus gallus
 RPL14ENSG00000188846Homo sapiens
 Rpl14ENSMUSG00000025794Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002784  Ribosomal protein L14e domain
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000029 hindbrain hindbrain quality , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary quality , abnormal
midbrain hindbrain boundary condensed , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
yolk grey , abnormal
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 ZFA:0000106 extension extension decreased thickness , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle distended , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000142 peripheral nervous system peripheral nervous system nerve neoplastic , abnormal
peripheral nervous system chromosome amount , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
whole organism viability , abnormal
whole organism necrotic , abnormal
whole organism edematous , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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