ENSDARG00000103907


Danio rerio

Features
Gene ID: ENSDARG00000103907
  
Biological name :sgo1
  
Synonyms : sgo1 / shugoshin 1
  
Possible biological names infered from orthology : Q5FBB7 / Q9CXH7
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 48351624
Gene end: 48363423
  
Corresponding Affymetrix probe sets: Dr.25796.1.A1_at (Zebrafish Array)   NM_001080620_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134292
Ensembl peptide - ENSDARP00000136487
NCBI entrez gene - 791138     See in Manteia.
RefSeq - NM_001080620
RefSeq Peptide - NP_001074089
swissprot - F1RCC6
swissprot - A0A0R4IFW7
ZFIN ID - ZDB-GENE-070112-422
Ensembl - ENSDARG00000103907
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGO1ENSGALG00000011281Gallus gallus
 SGO1ENSG00000129810Homo sapiens
 Sgo1ENSMUSG00000023940Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011515  Shugoshin, C-terminal
 IPR028321  Shugoshin 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008016 regulation of heart contraction IMP
 biological_processGO:0045132 meiotic chromosome segregation IEA
 biological_processGO:0071962 mitotic sister chromatid cohesion, centromeric IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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