ENSDARG00000104177


Danio rerio

Features
Gene ID: ENSDARG00000104177
  
Biological name :cpne3
  
Synonyms : copine III / cpne3
  
Possible biological names infered from orthology : copine 3 / O75131 / Q8BT60
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 31374324
Gene end: 31404622
  
Corresponding Affymetrix probe sets: Dr.21059.1.S1_at (Zebrafish Array)   Dr.3921.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000139825
Ensembl peptide - ENSDARP00000140742
Ensembl peptide - ENSDARP00000145933
NCBI entrez gene - 393136     See in Manteia.
RefSeq - NM_200167
RefSeq Peptide - NP_956461
swissprot - F1Q9D2
ZFIN ID - ZDB-GENE-040426-763
Ensembl - ENSDARG00000104177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CPNE3ENSGALG00000035561Gallus gallus
 CPNE3ENSG00000085719Homo sapiens
 Cpne3ENSMUSG00000028228Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cpne1 / copine I / Q8C166* / Q99829* / copine 1*ENSDARG0000007553669
cpne2 / copine II / P59108* / Q96FN4* / copine 2*ENSDARG0000000775364
cpne7 / copine VII / Q0VE82* / Q9UBL6* / copine 7*ENSDARG0000010258458
cpne4a / copine IVa / CPNE4* / Q8BLR2* / Q96A23* / copine 4*ENSDARG0000010109556
cpne4b / copine IVb / CPNE4* / Q8BLR2* / Q96A23* / copine 4*ENSDARG0000010425455
cpne5b / copine Vb / CPNE5* / Q9HCH3* / copine 5*ENSDARG0000007091954
cpne5a / copine Va / CPNE5* / Q8JZW4* / Q9HCH3* / copine 5*ENSDARG0000006146654
cpne8 / copine VIII / Q86YQ8* / Q9DC53* / copine 8* / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA.*ENSDARG0000002518953
cpne9 / copine family member IX / Q8IYJ1* / copine family member 9*ENSDARG0000009825245
CABZ01041913.1 / CPNE8* / Q86YQ8* / Q9DC53* / copine 8* / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA.*ENSDARG0000010219144
CABZ01087415.1ENSDARG0000011509410


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR002035  von Willebrand factor, type A
 IPR010734  Copine


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Glycerophospholipid biosynthesis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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