ENSDARG00000075536


Danio rerio

Features
Gene ID: ENSDARG00000075536
  
Biological name :cpne1
  
Synonyms : copine I / cpne1
  
Possible biological names infered from orthology : copine 1 / Q8C166 / Q99829
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 26375979
Gene end: 26401674
  
Corresponding Affymetrix probe sets: Dr.5243.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000082086
Ensembl peptide - ENSDARP00000140424
Ensembl peptide - ENSDARP00000094289
NCBI entrez gene - 324841     See in Manteia.
RefSeq - NM_199699
RefSeq - XM_009306020
RefSeq - XM_005169258
RefSeq - XM_005169257
RefSeq - XM_005169262
RefSeq - XM_017358205
RefSeq - NM_001276281
RefSeq Peptide - NP_955993
RefSeq Peptide - NP_001263210
swissprot - Q6TEN9
swissprot - F1QNY5
ZFIN ID - ZDB-GENE-030131-3562
Ensembl - ENSDARG00000075536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CPNE1ENSGALG00000040856Gallus gallus
 CPNE1ENSG00000214078Homo sapiens
 Cpne1ENSMUSG00000074643Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cpne3 / copine III / O75131* / Q8BT60* / copine 3*ENSDARG0000010417768
cpne2 / copine II / P59108* / Q96FN4* / copine 2*ENSDARG0000000775363
cpne7 / copine VII / Q0VE82* / Q9UBL6* / copine 7*ENSDARG0000010258454
cpne5b / copine Vb / CPNE5* / Q9HCH3* / copine 5*ENSDARG0000007091951
cpne4b / copine IVb / CPNE4* / Q8BLR2* / Q96A23* / copine 4*ENSDARG0000010425451
cpne5a / copine Va / CPNE5* / Q8JZW4* / Q9HCH3* / copine 5*ENSDARG0000006146650
cpne4a / copine IVa / CPNE4* / Q8BLR2* / Q96A23* / copine 4*ENSDARG0000010109550
cpne8 / copine VIII / Q86YQ8* / Q9DC53* / copine 8* / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA.*ENSDARG0000002518949
cpne9 / copine family member IX / Q8IYJ1* / copine family member 9*ENSDARG0000009825241
CABZ01041913.1 / CPNE8* / Q86YQ8* / Q9DC53* / copine 8* / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA.*ENSDARG0000010219140
CABZ01087415.1ENSDARG000001150949


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR002035  von Willebrand factor, type A
 IPR010734  Copine


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Glycerophospholipid biosynthesis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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