ENSGALG00000040856


Gallus gallus

Features
Gene ID: ENSGALG00000040856
  
Biological name :CPNE1
  
Synonyms : copine 1 / CPNE1
  
Possible biological names infered from orthology : Q8C166 / Q99829
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 1081475
Gene end: 1127448
  
Corresponding Affymetrix probe sets: Gga.9298.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055422
Ensembl peptide - ENSGALP00000046141
Ensembl peptide - ENSGALP00000055233
NCBI entrez gene - 419134     See in Manteia.
RefSeq - NM_001171738
RefSeq Peptide - NP_001165209
swissprot - F1NKY6
Ensembl - ENSGALG00000040856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpne1ENSDARG00000075536Danio rerio
 CPNE1ENSG00000214078Homo sapiens
 Cpne1ENSMUSG00000074643Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CPNE2 / copine 2 / P59108* / Q96FN4*ENSGALG0000000131663
CPNE4 / copine 4 / Q8BLR2* / Q96A23*ENSGALG0000002923552
CPNE8 / copine 8 / Q86YQ8* / Q9DC53* / Mus musculus copine VIII (Cpne8), transcript variant 3, mRNA.*ENSGALG0000000702551
CPNE5 / copine 5 / Q8JZW4* / Q9HCH3*ENSGALG0000003067648
CPNE9 / copine family member 9 / Q8IYJ1*ENSGALG0000003640647
CPNE7 / copine 7 / Q0VE82* / Q9UBL6*ENSGALG0000000050744
CPNE3 / copine 3 / O75131* / Q8BT60*ENSGALG0000003556135


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR002035  von Willebrand factor, type A
 IPR010734  Copine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0031965 nuclear membrane IEA


Pathways (from Reactome)
Pathway description
Glycerophospholipid biosynthesis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr