ENSDARG00000104836


Danio rerio

Features
Gene ID: ENSDARG00000104836
  
Biological name :myom1b
  
Synonyms : myom1b / myomesin 1b
  
Possible biological names infered from orthology : MYOM1 / myomesin 1 / P52179 / Q62234
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 71688710
Gene end: 71758613
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133738
Ensembl peptide - ENSDARP00000142563
Ensembl peptide - ENSDARP00000138459
NCBI entrez gene - 100144770     See in Manteia.
RefSeq - XM_009303643
RefSeq - XM_017357145
RefSeq - XM_017357146
RefSeq - XM_009303640
RefSeq - XM_009303642
swissprot - A0A140LH33
swissprot - A0A0R4IUZ8
swissprot - A0A0R4IGQ8
ZFIN ID - ZDB-GENE-080416-2
Ensembl - ENSDARG00000104836
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYOM1ENSGALG00000014847Gallus gallus
 MYOM1ENSG00000101605Homo sapiens
 Myom1ENSMUSG00000024049Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myom1a / myomesin 1a (skelemin) / MYOM1* / Q62234* / P52179* / myomesin 1*ENSDARG0000006124955
myom2a / myomesin 2a / MYOM2* / P54296* / myomesin 2*ENSDARG0000007543337
CABZ01061524.1 / MYOM2* / P54296* / myomesin 2*ENSDARG0000011069827
igfn1.3 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 3 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000009761313
igfn1.2 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 2 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000007592613
mybpc3 / myosin binding protein C, cardiac / Q14896*ENSDARG0000001161513
mybpc2b / myosin binding protein C, fast type b / Q5XKE0* / MYBPC2* / Q14324* / myosin binding protein C, fast type*ENSDARG0000002126512
mybpc2a / myosin binding protein C, fast type a / Q5XKE0* / MYBPC2* / Q14324* / myosin binding protein C, fast type*ENSDARG0000003015712
igfn1.4 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 4 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000008602812
mybpc1 / myosin binding protein C, slow type / Q00872*ENSDARG0000004556011
mybphb / myosin binding protein Hb / MYBPH* / A2RUH7* / MYBPHL* / P70402* / Q13203* / Q5FW53* / myosin binding protein H* / myosin binding protein H like* / Mus musculus myosin binding prot...ENSDARG000000030816
mybpha / myosin binding protein Ha / MYBPH* / A2RUH7* / MYBPHL* / P70402* / Q13203* / Q5FW53* / myosin binding protein H* / myosin binding protein H like* / Mus musculus myosin binding prot...ENSDARG000000587996
igfn1.1 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 1 / IGFN1* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing 1*ENSDARG000000055265


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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