ENSDARG00000011615


Danio rerio

Features
Gene ID: ENSDARG00000011615
  
Biological name :mybpc3
  
Synonyms : mybpc3 / myosin binding protein C, cardiac
  
Possible biological names infered from orthology : Q14896
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 31838320
Gene end: 31899925
  
Corresponding Affymetrix probe sets: Dr.10628.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000109343
Ensembl peptide - ENSDARP00000143224
Ensembl peptide - ENSDARP00000142946
Ensembl peptide - ENSDARP00000120798
Ensembl peptide - ENSDARP00000117282
Ensembl peptide - ENSDARP00000116505
Ensembl peptide - ENSDARP00000090562
NCBI entrez gene - 556489     See in Manteia.
RefSeq - NM_001044349
RefSeq - XM_009303217
RefSeq - XM_009303221
RefSeq Peptide - NP_001037814
swissprot - A0A1D5NSX5
swissprot - F1Q615
swissprot - F1QVS1
swissprot - E9QCH0
swissprot - E9QBD5
swissprot - E7EZ79
swissprot - A0A1L1QZU5
ZFIN ID - ZDB-GENE-070112-2362
Ensembl - ENSDARG00000011615
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYBPC3ENSGALG00000008148Gallus gallus
 MYBPC3ENSG00000134571Homo sapiens
 Mybpc3ENSMUSG00000002100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mybpc2a / myosin binding protein C, fast type a / Q5XKE0* / MYBPC2* / Q14324* / myosin binding protein C, fast type*ENSDARG0000003015753
mybpc2b / myosin binding protein C, fast type b / Q5XKE0* / MYBPC2* / Q14324* / myosin binding protein C, fast type*ENSDARG0000002126552
mybpc1 / myosin binding protein C, slow type / Q00872*ENSDARG0000004556049
igfn1.2 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 2 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000007592623
igfn1.3 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 3 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000009761322
igfn1.4 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 4 / IGFN1* / Q3KNY0* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing ...ENSDARG0000008602821
mybpha / myosin binding protein Ha / MYBPH* / A2RUH7* / MYBPHL* / P70402* / Q13203* / Q5FW53* / myosin binding protein H* / myosin binding protein H like* / Mus musculus myosin binding prot...ENSDARG0000005879920
mybphb / myosin binding protein Hb / MYBPH* / A2RUH7* / MYBPHL* / P70402* / Q13203* / Q5FW53* / myosin binding protein H* / myosin binding protein H like* / Mus musculus myosin binding prot...ENSDARG0000000308120
myom1a / myomesin 1a (skelemin) / MYOM1* / Q62234* / P52179* / myomesin 1*ENSDARG0000006124916
myom1b / myomesin 1b / MYOM1* / Q62234* / P52179* / myomesin 1*ENSDARG0000010483616
myom2a / myomesin 2a / MYOM2* / P54296* / myomesin 2*ENSDARG0000007543314
igfn1.1 / immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 1 / IGFN1* / Q86VF2* / immunoglobulin-like and fibronectin type III domain containing 1*ENSDARG0000000552611
CABZ01061524.1 / MYOM2* / P54296* / myomesin 2*ENSDARG000001106989


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002027 regulation of heart rate IMP
 biological_processGO:0003210 cardiac atrium formation IMP
 biological_processGO:0003211 cardiac ventricle formation IMP
 biological_processGO:0006941 striated muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 biological_processGO:0045214 sarcomere organization IBA
 biological_processGO:0055010 ventricular cardiac muscle tissue morphogenesis IMP
 biological_processGO:0071688 striated muscle myosin thick filament assembly IBA
 cellular_componentGO:0005859 muscle myosin complex IBA
 cellular_componentGO:0030018 Z disc IBA
 cellular_componentGO:0031430 M band IBA
 molecular_functionGO:0008307 structural constituent of muscle IBA
 molecular_functionGO:0051015 actin filament binding IBA
 molecular_functionGO:0051371 muscle alpha-actinin binding IBA
 molecular_functionGO:0097493 structural molecule activity conferring elasticity IBA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle increased size , abnormal
cardiac ventricle hypertrophic , abnormal
cardiac ventricle portion of tissue increased thickness , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart decreased functionality , abnormal
heart increased size , abnormal
Show

 ZFA:0000471 atrium atrium increased size , abnormal
atrium portion of tissue decreased thickness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr