ENSDARG00000104837


Danio rerio

Features
Gene ID: ENSDARG00000104837
  
Biological name :nudc
  
Synonyms : nudc / nudC nuclear distribution protein
  
Possible biological names infered from orthology : nuclear distribution C, dynein complex regulator / Nuclear migration protein nudC / O35685 / Q9Y266
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 14158075
Gene end: 14169457
  
Corresponding Affymetrix probe sets: Dr.19967.1.S1_at (Zebrafish Array)   NM_200919_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000138015
Ensembl peptide - ENSDARP00000136053
NCBI entrez gene - 393893     See in Manteia.
RefSeq - NM_200919
RefSeq Peptide - NP_957213
swissprot - A0A0R4IR03
swissprot - Q6NV13
ZFIN ID - ZDB-GENE-040426-899
Ensembl - ENSDARG00000104837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUDCENSGALG00000000895Gallus gallus
 NUDCENSG00000090273Homo sapiens
 NudcENSMUSG00000028851Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nudcd3 / NudC domain containing 3 / Q8IVD9* / Q8R1N4* / NudC domain-containing protein 3 *ENSDARG0000009836124


Protein motifs (from Interpro)
Interpro ID Name
 IPR007052  CS domain
 IPR008978  HSP20-like chaperone
 IPR025934  NudC N-terminal domain
 IPR032572  Nuclear migration protein nudC


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060271 cilium assembly IGI
 biological_processGO:0061371 determination of heart left/right asymmetry IGI


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins
Mitotic Telophase/Cytokinesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium increased length , abnormal
Show

 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000150 pronephric duct pronephric duct dilated , abnormal
pronephric duct cilium increased length , abnormal
pronephric duct anterior region dilated , abnormal
pronephric duct epithelial cilium movement process quality , abnormal
pronephric duct cilium disorganized , abnormal
pronephric duct cilium decreased coordination , abnormal
Show

 ZFA:0000360 heart tube heart tube mislocalised medially , abnormal
heart tube displaced to whole organism right side, abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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