ENSDARG00000105185


Danio rerio

Features
Gene ID: ENSDARG00000105185
  
Biological name :snx7
  
Synonyms : snx7 / sorting nexin 7
  
Possible biological names infered from orthology : Q9CY18 / Q9UNH6
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 30225967
Gene end: 30275735
  
Corresponding Affymetrix probe sets: Dr.13759.1.S1_at (Zebrafish Array)   Dr.25917.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000131073
Ensembl peptide - ENSDARP00000133335
Ensembl peptide - ENSDARP00000132716
NCBI entrez gene - 431776     See in Manteia.
swissprot - A0A0R4IIY5
swissprot - A0A0R4ID61
swissprot - A0A0R4IBS8
ZFIN ID - ZDB-GENE-040704-77
Ensembl - ENSDARG00000105185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX7ENSGALG00000005478Gallus gallus
 SNX7ENSG00000162627Homo sapiens
 Snx7ENSMUSG00000028007Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx30 / sorting nexin family member 30 / Q5VWJ9* / Q8CE50* / Sorting nexin-30 *ENSDARG0000006960140
snx4 / sorting nexin 4 / O95219* / Q91YJ2*ENSDARG0000002265922


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR015404  Sorting nexin Vps5-like, C-terminal
 IPR027267  AH/BAR domain superfamily
 IPR028656  Sorting nexin-7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001889 liver development IMP
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0097153 cysteine-type endopeptidase activity involved in apoptotic process IGI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009111 hepatocyte hepatocyte apoptotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr